AURORA / model /aurora_decoder.py
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"""Copyright (c) Microsoft Corporation. Licensed under the MIT license."""
from datetime import timedelta
from typing import Optional
import torch
from einops import rearrange
from torch import nn
from .aurora_batch import Batch, Metadata
from .aurora_fourier import levels_expansion
from .aurora_levelcond import LevelConditioned
from .aurora_perceiver import PerceiverResampler
from .aurora_util import (
check_lat_lon_dtype,
init_weights,
unpatchify,
)
__all__ = ["Perceiver3DDecoder"]
class LinearPatchReconstruction(nn.Linear):
"""Linear layer for patch reconstruction."""
class Perceiver3DDecoder(nn.Module):
"""Multi-scale multi-source multi-variable decoder based on the Perceiver architecture."""
def __init__(
self,
surf_vars: tuple[str, ...],
atmos_vars: tuple[str, ...],
patch_size: int = 4,
embed_dim: int = 1024,
depth: int = 1,
head_dim: int = 64,
num_heads: int = 8,
mlp_ratio: float = 4.0,
drop_rate: float = 0.0,
perceiver_ln_eps: float = 1e-5,
level_condition: Optional[tuple[int | float, ...]] = None,
separate_perceiver: tuple[str, ...] = (),
modulation_heads: tuple[str, ...] = (),
) -> None:
"""Initialise.
Args:
surf_vars (tuple[str, ...]): All supported surface-level variables.
atmos_vars (tuple[str, ...]): All supported atmospheric variables.
patch_size (int, optional): Patch size. Defaults to `4`.
embed_dim (int, optional): Embedding dim.. Defaults to `1024`.
depth (int, optional): Number of Perceiver cross-attention and feed-forward blocks.
Defaults to `1`.
head_dim (int, optional): Dimension of the attention heads used in the aggregation
blocks. Defaults to `64`.
num_heads (int, optional): Number of attention heads used in the aggregation blocks.
Defaults to `8`.
mlp_ratio (float, optional): Ratio of MLP hidden dimension to embedding dimensionality.
Defaults to `4.0`.
drop_rate (float, optional): Drop-out rate for input patches. Defaults to `0.0`.
perceiver_ln_eps (float, optional): Layer norm. epsilon for the Perceiver blocks.
Defaults to `1e-5`.
level_condition (tuple[int | float, ...], optional): Make the patch embeddings dependent
on pressure level. If you want to enable this feature, provide a tuple of all
possible pressure levels.
separate_perceiver (tuple[str, ...], optional): In the decoder, use a separate Perceiver
for specific atmospheric variables. This can be helpful at fine-tuning time to deal
with variables that have a significantly different behaviour. If you want to enable
this features, set this to the collection of variables that should be run on a
separate Perceiver.
modulation_heads (tuple[str, ...], optional): Names of every variable for which to
enable an additional head, the so-called modulation head, that can be used to
predict the difference.
"""
super().__init__()
# If additional modulation heads are required, simulate them as different variables with
# the suffix `_mod`.
surf_vars += tuple(f"{name}_mod" for name in surf_vars if name in modulation_heads)
atmos_vars += tuple(f"{name}_mod" for name in atmos_vars if name in modulation_heads)
if modulation_heads:
separate_perceiver += tuple(f"{name}_mod" for name in separate_perceiver)
self.patch_size = patch_size
self.surf_vars = surf_vars
self.atmos_vars = atmos_vars
self.embed_dim = embed_dim
self.level_condition = level_condition
self.separate_perceiver = separate_perceiver
self.modulation_heads = modulation_heads
self.level_decoder = PerceiverResampler(
latent_dim=embed_dim,
context_dim=embed_dim,
depth=depth,
head_dim=head_dim,
num_heads=num_heads,
mlp_ratio=mlp_ratio,
drop=drop_rate,
residual_latent=True,
ln_eps=perceiver_ln_eps,
)
if self.separate_perceiver:
self.level_decoder_alternate = PerceiverResampler(
latent_dim=embed_dim,
context_dim=embed_dim,
depth=depth,
head_dim=head_dim,
num_heads=num_heads,
mlp_ratio=mlp_ratio,
drop=drop_rate,
residual_latent=True,
ln_eps=perceiver_ln_eps,
)
self.surf_heads = nn.ParameterDict(
{name: LinearPatchReconstruction(embed_dim, patch_size**2) for name in surf_vars}
)
if not self.level_condition:
self.atmos_heads = nn.ParameterDict(
{name: LinearPatchReconstruction(embed_dim, patch_size**2) for name in atmos_vars}
)
else:
self.atmos_heads = nn.ParameterDict(
{
name: LevelConditioned(
lambda: LinearPatchReconstruction(embed_dim, patch_size**2),
levels=self.level_condition,
levels_dim=-2,
)
for name in atmos_vars
}
)
self.atmos_levels_embed = nn.Linear(embed_dim, embed_dim)
self.apply(init_weights)
def deaggregate_levels(
self,
level_embed: torch.Tensor,
x: torch.Tensor,
level_decoder: nn.Module,
) -> torch.Tensor:
"""Deaggregate pressure level information.
Args:
level_embed (torch.Tensor): Level embedding of shape `(B, L, C, D)`.
x (torch.Tensor): Aggregated input of shape `(B, L, C', D)`.
level_decoder (nn.Module): Pressure level decoder.
Returns:
torch.Tensor: Deaggregate output of shape `(B, L, C, D)`.
"""
B, L, C, D = level_embed.shape
level_embed = level_embed.flatten(0, 1) # (BxL, C, D)
x = x.flatten(0, 1) # (BxL, C', D)
_msg = f"Batch size mismatch. Found {level_embed.size(0)} and {x.size(0)}."
assert level_embed.size(0) == x.size(0), _msg
assert len(level_embed.shape) == 3, f"Expected 3 dims, found {level_embed.dims()}."
assert x.dim() == 3, f"Expected 3 dims, found {x.dim()}."
x = level_decoder(level_embed, x) # (BxL, C, D)
x = x.reshape(B, L, C, D)
return x
def forward(
self,
x: torch.Tensor,
batch: Batch,
patch_res: tuple[int, int, int],
lead_times: torch.Tensor,
) -> Batch:
"""Forward pass.
Args:
x (torch.Tensor): Backbone output of shape `(B, L, D)`.
batch (:class:`aurora.Batch`): Batch to make predictions for.
patch_res (tuple[int, int, int]): Patch resolution
lead_times (torch.Tensor): Lead times of shape `(batch,)` in hours.
Returns:
:class:`aurora.batch.Batch`: Prediction for `batch`.
"""
surf_vars = tuple(batch.surf_vars.keys())
atmos_vars = tuple(batch.atmos_vars.keys())
atmos_levels = batch.metadata.atmos_levels
# If additional modulation heads are required, simulate them as different variables with
# the suffix `_mod`.
surf_vars += tuple(f"{name}_mod" for name in surf_vars if name in self.modulation_heads)
atmos_vars += tuple(f"{name}_mod" for name in atmos_vars if name in self.modulation_heads)
# Compress the latent dimension from the U-net skip concatenation.
B, L, D = x.shape
# Extract the lat, lon and convert to float32.
lat, lon = batch.metadata.lat, batch.metadata.lon
check_lat_lon_dtype(lat, lon)
lat, lon = lat.to(dtype=torch.float32), lon.to(dtype=torch.float32)
H, W = lat.shape[0], lon.shape[-1]
# Unwrap the latent level dimension.
x = rearrange(
x,
"B (C H W) D -> B (H W) C D",
C=patch_res[0],
H=patch_res[1],
W=patch_res[2],
)
# Decode surface vars. Run the head for every surface-level variable.
x_surf = torch.stack([self.surf_heads[name](x[..., :1, :]) for name in surf_vars], dim=-1)
x_surf = x_surf.reshape(*x_surf.shape[:3], -1) # (B, L, 1, V_S*p*p)
surf_preds = unpatchify(x_surf, len(surf_vars), H, W, self.patch_size)
surf_preds = surf_preds.squeeze(2) # (B, V_S, H, W)
# Embed the atmospheric levels.
atmos_levels_encode = levels_expansion(
torch.tensor(atmos_levels, device=x.device), self.embed_dim
).to(dtype=x.dtype)
levels_embed = self.atmos_levels_embed(atmos_levels_encode) # (C_A, D)
# De-aggregate the hidden levels into the physical levels.
levels_embed = levels_embed.expand(B, x.size(1), -1, -1)
x_atmos = self.deaggregate_levels(
levels_embed,
x[..., 1:, :],
self.level_decoder,
) # (B, L, C_A, D)
if self.separate_perceiver:
x_atmos_alternate = self.deaggregate_levels(
levels_embed,
x[..., 1:, :],
self.level_decoder_alternate,
)
else:
# `x_atmos_alternate` won't be used, but we define the variable anyway for type
# stability.
x_atmos_alternate = x_atmos
# Decode the atmospheric vars. Per variable, first determine whether the main or alternate
# Perceiver pressure level decoder should be used.
head_inputs = [
x_atmos if name not in self.separate_perceiver else x_atmos_alternate
for name in atmos_vars
]
if not self.level_condition:
x_atmos = torch.stack(
[self.atmos_heads[name](x) for name, x in zip(atmos_vars, head_inputs)],
dim=-1,
)
else:
x_atmos = torch.stack(
[
self.atmos_heads[name](x, levels=atmos_levels)
for name, x in zip(atmos_vars, head_inputs)
],
dim=-1,
)
x_atmos = x_atmos.reshape(*x_atmos.shape[:3], -1) # (B, L, C_A, V_A*p*p)
atmos_preds = unpatchify(x_atmos, len(atmos_vars), H, W, self.patch_size)
# Compute output times from per-sample lead times.
pred_time = tuple(
t + timedelta(hours=float(lead_times[i])) for i, t in enumerate(batch.metadata.time)
)
return Batch(
{v: surf_preds[:, i] for i, v in enumerate(surf_vars)},
batch.static_vars,
{v: atmos_preds[:, i] for i, v in enumerate(atmos_vars)},
Metadata(
lat=lat,
lon=lon,
time=pred_time,
atmos_levels=atmos_levels,
rollout_step=batch.metadata.rollout_step + 1,
),
)